Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX493542: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-323517' containing sample 'Citrobacter species MGH 55'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.3M spots, 1.3G bases, 819.3Mb downloads

UUID: 72c02f2f-9280-493d-8b0c-6fecde03018f

Design: Illumina sequencing of Citrobacter sp. MGH 55 via random selection

Submitted by: Broad Institute (BI)

Study: Carbapenem

PRJNA234254 • SRP040181 • All experiments • All runs

Sample:

SAMN02581387 • SRS576230 • All experiments • All runs

Organism: Citrobacter sp. MGH 55

Library:

Name: Pond-323517

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 488636.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5GLT9

material_type: DNA:DNA Somatic

product_order: PDO-2646

product_part_number: P-MCV-0001

project: G55851

research_project: RP-188

root_sample_id: SM-4OCK4

sample_id: SM-5GLT9

work_request: 39791

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-03-11 22:50:56.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.3M spots, 1.3G bases, 819.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1196747	3,171,014	640.5M	414.2Mb	2014-03-16
SRR1197693	3,108,933	628M	405.1Mb	2014-03-17

ID:: 683639

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